CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Smp_093750
(
Schistosoma mansoni
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
Smp_093750
T61686_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_093750.1
S1
13
87
PEVGDVVLVTVKVIQSMGSYVELLEYKNIGGMILHSELSRRRIRSISKLVRIGSNTEVTVVRVDSAKGYIDLSKR
Smp_093750.2
S1
13
87
PEVGDVVLVTVKVIQSMGSYVELLEYKNIGGMILHSELSRRRIRSISKLVRIGSNTEVTVVRVDSAKGYIDLSKR
Links
Other
S1
family RBPs
Other
Schistosoma mansoni
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Sjc_0067760
Schistosoma japonicum
Sjc_0067760
N
0.880
EIF2S1
Ochotona princeps
ENSOPRG00000004520
I
0.720
EIF2S1
Oryzias latipes
ENSORLG00000011844
I
0.720
EIF2S1
Procavia capensis
ENSPCAG00000002613
I
0.720
IF2A_RABIT
Oryctolagus cuniculus
ENSOCUG00000012023
I
0.720
Eif2s1
Mus musculus
ENSMUSG00000021116
I
0.720
EIF2S1
Macaca mulatta
ENSMMUG00000021419
I
0.720
EIF2S1
Monodelphis domestica
ENSMODG00000009911
I
0.720
ENSPPYG00000005921
Pongo pygmaeus
ENSPPYG00000005921
I
0.720
EIF2S1
Ornithorhynchus anatinus
ENSOANG00000005409
I
0.720
Eif2s1
Rattus norvegicus
ENSRNOG00000009432
I
0.720
EIF2S1
Tetraodon nigroviridis
ENSTNIG00000012223
I
0.720
EIF2S1
Takifugu rubripes
ENSTRUG00000017958
I
0.720
EIF2S1
Tursiops truncatus
ENSTTRG00000015806
I
0.720
Ame_R013633
Ailuropoda melanoleuca
Ame_R013633
I
0.720
EIF2S1
Taeniopygia guttata
ENSTGUG00000011542
I
0.720
EIF2S1
Spermophilus tridecemlineatus
ENSSTOG00000001565
I
0.720
EIF2S1
Meleagris gallopavo
ENSMGAG00000011974
I
0.720
EIF2S1
Sorex araneus
ENSSARG00000011682
I
0.720
EIF2S1
Sus scrofa
ENSSSCG00000002289
I
0.720
EIF2S1
Pan troglodytes
ENSPTRG00000006462
I
0.720
EIF2S1
Microcebus murinus
ENSMICG00000010793
I
0.720
ENSCHOG00000009030
Choloepus hoffmanni
ENSCHOG00000009030
I
0.720
EIF2S1
Loxodonta africana
ENSLAFG00000013423
I
0.720
EIF2S1
Cavia porcellus
ENSCPOG00000003313
I
0.720
EIF2S1
Canis familiaris
ENSCAFG00000016386
I
0.720
IF2A_BOVIN
Bos taurus
ENSBTAG00000016311
I
0.720
AAH46576
Xenopus laevis
AAH46576
I
0.720
Q7ZTK4
Xenopus laevis
Q7ZTK4
I
0.720
EIF2S1
Anolis carolinensis
ENSACAG00000005994
I
0.720
eif2s1l
Danio rerio
ENSDARG00000005827
I
0.720
LOC100399114
Callithrix jacchus
ENSCJAG00000015368
I
0.720
eif2s1
Danio rerio
ENSDARG00000052178
I
0.720
EIF2S1
Gasterosteus aculeatus
ENSGACG00000008569
I
0.720
IF2A_CHICK
Gallus gallus
ENSGALG00000009565
I
0.720
EIF2S1
Gorilla gorilla
ENSGGOG00000001603
I
0.720
EIF2S1
Echinops telfairi
ENSETEG00000019003
I
0.720
EIF2S1
Homo sapiens
ENSG00000134001
I
0.720
Eif2s1
Dipodomys ordii
ENSDORG00000002382
I
0.720
LOC100052709
Equus caballus
ENSECAG00000018424
I
0.720
EIF2S1
Erinaceus europaeus
ENSEEUG00000010225
I
0.720
estExt_Genewise1Plus.C_2350006
Capitella teleta
estExt_Genewise1Plus.C_2350006
I
0.707
XP_002156465.1
Hydra magnipapillata
XP_002156465.1
I
0.707
estExt_fgenesh2_pm.C_sca_10068
Lottia gigantea
estExt_fgenesh2_pm.C_sca_10068
I
0.707
e_gw1.7.228.1
Trichoplax adhaerens
e_gw1.7.228.1
I
0.707
ENSCHOG00000004230
Choloepus hoffmanni
ENSCHOG00000004230
I
0.707
ENSCHOG00000003744
Choloepus hoffmanni
ENSCHOG00000003744
I
0.707
estExt_fgenesh1_kg.C_130002
Sporobolomyces roseus
estExt_fgenesh1_kg.C_130002
I
0.707