fgenesh2_pg.3_#_1108 (Fragilariopsis cylindrus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh2_pg.3_#_1108 T14151_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.3_#_1108 CCHC ZF 340 357

Links

Other CCHC ZF family RBPs
Other Fragilariopsis cylindrus RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_06444 Puccinia graminis PGTG_06444 N 0.000
PGTG_14423 Puccinia graminis PGTG_14423 N 0.000
PTTG_01104 Puccinia triticina PTTG_01104 N 0.000
PTTG_02420 Puccinia triticina PTTG_02420 N 0.000
PTTG_03218 Puccinia triticina PTTG_03218 N 0.000
PTTG_03789 Puccinia triticina PTTG_03789 N 0.000
PTTG_04161 Puccinia triticina PTTG_04161 N 0.000
PTTG_04996 Puccinia triticina PTTG_04996 N 0.000
PTTG_05128 Puccinia triticina PTTG_05128 N 0.000
PTTG_06497 Puccinia triticina PTTG_06497 N 0.000
PTTG_08079 Puccinia triticina PTTG_08079 N 0.000
PTTG_09555 Puccinia triticina PTTG_09555 N 0.000
PTTG_10840 Puccinia triticina PTTG_10840 N 0.000
PTTG_11093 Puccinia triticina PTTG_11093 N 0.000