CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PTTG_11093
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_11093
T08496_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_11093T0
CCHC ZF
36
53
VACSNCGKRGHQSNKCPK
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_05128
Puccinia triticina
PTTG_05128
N
1.000
PTTG_09555
Puccinia triticina
PTTG_09555
N
0.889
PTTG_10254
Puccinia triticina
PTTG_10254
N
0.889
PTTG_08079
Puccinia triticina
PTTG_08079
N
0.833
PTTG_10840
Puccinia triticina
PTTG_10840
N
0.833
PTTG_04996
Puccinia triticina
PTTG_04996
N
0.833
PTTG_02420
Puccinia triticina
PTTG_02420
N
0.833
PTTG_03218
Puccinia triticina
PTTG_03218
N
0.778
PGTG_06444
Puccinia graminis
PGTG_06444
N
0.778
PGTG_10181
Puccinia graminis
PGTG_10181
N
0.722
PGTG_14423
Puccinia graminis
PGTG_14423
N
0.722
PTTG_01104
Puccinia triticina
PTTG_01104
N
0.722
PTTG_06497
Puccinia triticina
PTTG_06497
N
0.722