CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ame_R016826
(
Ailuropoda melanoleuca
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Ame_R016826
T15262_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R016826
CCHC ZF
571
588
RGCAFCGGLGHRITDCPK
Links
Other
CCHC ZF
family RBPs
Other
Ailuropoda melanoleuca
RBPs
78 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
10543_YHL034C
Saccharomyces paradoxus
10543_YHL034C
N
0.000
9478_YHL034C
Saccharomyces mikatae
9478_YHL034C
N
0.000
SBP1
Saccharomyces cerevisiae
YHL034C
N
0.000
Skud_Contig1834.2
Saccharomyces kudriavzevii
Skud_Contig1834.2
N
0.000