CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.10994_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.10994_g
T15671_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.10994_g
CCHC ZF
127
144
GNCYNCGQEGHMSRDCRN
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
58 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R008026
Ailuropoda melanoleuca
Ame_R008026
N
0.000
BRUNOL4
Homo sapiens
ENSG00000101489
D
0.000
CELF4
Macaca mulatta
ENSMMUG00000006866
I
0.000
CELF4
Pan troglodytes
ENSPTRG00000009982
N
0.000
Celf5
Mus musculus
ENSMUSG00000034818
N
0.000
CELF5
Ornithorhynchus anatinus
ENSOANG00000009501
N
0.000
LOC100386457
Callithrix jacchus
ENSCJAG00000021135
I
0.000