CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.2433_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.2433_g
T15710_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.2433_g
CCHC ZF
134
151
GNCYNCGQEGHMSQDCRN
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
58 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIBMGA011784
Bombyx mori
BGIBMGA011784
N
0.000
CBG08763
Caenorhabditis briggsae
CBG08763
N
0.000
CJA00848
Caenorhabditis japonica
CJA00848
N
0.000
CJA02670
Caenorhabditis japonica
CJA02670
N
0.000
CJA02757
Caenorhabditis japonica
CJA02757
N
0.000
CJA04336
Caenorhabditis japonica
CJA04336
N
0.000
CJA05078
Caenorhabditis japonica
CJA05078
N
0.000
CJA07934
Caenorhabditis japonica
CJA07934
N
0.000
CJA10177
Caenorhabditis japonica
CJA10177
N
0.000
CJA10427
Caenorhabditis japonica
CJA10427
N
0.000
CJA11030
Caenorhabditis japonica
CJA11030
N
0.000
CJA13138
Caenorhabditis japonica
CJA13138
N
0.000
CJA13503
Caenorhabditis japonica
CJA13503
N
0.000
CJA13676
Caenorhabditis japonica
CJA13676
N
0.000
CJA15447
Caenorhabditis japonica
CJA15447
N
0.000
CJA15515
Caenorhabditis japonica
CJA15515
N
0.000
CJA18092
Caenorhabditis japonica
CJA18092
N
0.000
CJA21290
Caenorhabditis japonica
CJA21290
N
0.000
CJA23650
Caenorhabditis japonica
CJA23650
N
0.000
CJA26146
Caenorhabditis japonica
CJA26146
N
0.000
CJA27243
Caenorhabditis japonica
CJA27243
N
0.000
CJA28002
Caenorhabditis japonica
CJA28002
N
0.000
CJA28132
Caenorhabditis japonica
CJA28132
N
0.000
CJA29053
Caenorhabditis japonica
CJA29053
N
0.000
CRE03331
Caenorhabditis remanei
CRE03331
N
0.000
CRE06628
Caenorhabditis remanei
CRE06628
N
0.000
CRE09308
Caenorhabditis remanei
CRE09308
N
0.000
CRE19609
Caenorhabditis remanei
CRE19609
N
0.000
CRE29150
Caenorhabditis remanei
CRE29150
N
0.000
CRE30341
Caenorhabditis remanei
CRE30341
N
0.000