CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPCAG00000016105
(
Procavia capensis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSPCAG00000016105
T19323_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANKHD1
M002_0.6
Homo sapiens
AGACGWW
RNAcompete
Ray et al.(2013)
RNCMPT00002
0.766
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000015250
KH
1689
1741
SKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIXXXX
Links
Other
KH
family RBPs
Other
Procavia capensis
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R000345
Ailuropoda melanoleuca
Ame_R000345
I
0.766
ANKHD1
Taeniopygia guttata
ENSTGUG00000001656
I
0.766
ANKHD1
Homo sapiens
ENSG00000131503
D
0.766
ANKHD1
Gasterosteus aculeatus
ENSGACG00000018351
I
0.766
ANKHD1
Tetraodon nigroviridis
ENSTNIG00000008996
I
0.766
ankhd1
Xenopus tropicalis
ENSXETG00000018337
I
0.766
ankhd1
Danio rerio
ENSDARG00000077860
I
0.766
ANKHD1
Takifugu rubripes
ENSTRUG00000001146
I
0.766
ANKHD1
Callithrix jacchus
ENSCJAG00000016624
I
0.766
ANKHD1
Oryzias latipes
ENSORLG00000006908
I
0.766
Ankhd1
Mus musculus
ENSMUSG00000024483
I
0.766
ANKHD1-EIF4EBP3
Gallus gallus
ENSGALG00000001099
I
0.766
Ankhd1-Eif4ebp3
Rattus norvegicus
ENSRNOG00000030247
I
0.766
ENSACAG00000013168
Anolis carolinensis
ENSACAG00000013168
I
0.766
ENSBTAG00000010871
Bos taurus
ENSBTAG00000010871
I
0.766
ENSCAFG00000005786
Canis familiaris
ENSCAFG00000005786
I
0.766
ENSCHOG00000005963
Choloepus hoffmanni
ENSCHOG00000005963
I
0.766
ENSCPOG00000019435
Cavia porcellus
ENSCPOG00000019435
I
0.766
ENSDNOG00000014116
Dasypus novemcinctus
ENSDNOG00000014116
I
0.750
ENSETEG00000012639
Echinops telfairi
ENSETEG00000012639
I
0.766
ENSFCAG00000001275
Felis catus
ENSFCAG00000001275
I
0.766
ENSG00000249536
Homo sapiens
ENSG00000249536
I
0.766
ENSGGOG00000000288
Gorilla gorilla
ENSGGOG00000000288
I
0.766
ENSLAFG00000005337
Loxodonta africana
ENSLAFG00000005337
I
0.766
ENSMEUG00000013599
Macropus eugenii
ENSMEUG00000013599
I
1.000
ENSMICG00000000358
Microcebus murinus
ENSMICG00000000358
I
0.766
ENSMLUG00000003126
Myotis lucifugus
ENSMLUG00000003126
I
0.766
ENSMMUG00000019583
Macaca mulatta
ENSMMUG00000019583
I
0.766
ENSMODG00000011596
Monodelphis domestica
ENSMODG00000011596
I
0.766
ENSMUSG00000089986
Mus musculus
ENSMUSG00000089986
I
0.766
ENSOCUG00000015943
Oryctolagus cuniculus
ENSOCUG00000015943
I
0.766
ENSOGAG00000014263
Otolemur garnettii
ENSOGAG00000014263
I
0.766
ENSOPRG00000006675
Ochotona princeps
ENSOPRG00000006675
I
0.766
ENSPPYG00000015854
Pongo pygmaeus
ENSPPYG00000015854
I
0.766
ENSPVAG00000009697
Pteropus vampyrus
ENSPVAG00000009697
I
0.766
ENSSARG00000007287
Sorex araneus
ENSSARG00000007287
I
0.766
ENSSSCG00000014364
Sus scrofa
ENSSSCG00000014364
I
0.766
ENSSTOG00000001936
Spermophilus tridecemlineatus
ENSSTOG00000001936
I
0.766
ENSTSYG00000003323
Tarsius syrichta
ENSTSYG00000003323
I
0.766
ENSTTRG00000005573
Tursiops truncatus
ENSTTRG00000005573
I
0.766
ENSVPAG00000002452
Vicugna pacos
ENSVPAG00000002452
I
0.778
LOC100072419
Equus caballus
ENSECAG00000015036
I
0.766
SLC4A9
Meleagris gallopavo
ENSMGAG00000001068
I
0.766
XR_019937.1
Pan troglodytes
ENSPTRG00000017313
I
0.766