CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSVPAG00000002452
(
Vicugna pacos
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSVPAG00000002452
T19731_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ANKHD1
M002_0.6
Homo sapiens
AGACGWW
RNAcompete
Ray et al.(2013)
RNCMPT00002
0.906
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000002267
KH
1690
1751
SKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTETRYAVQLI
Links
Other
KH
family RBPs
Other
Vicugna pacos
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOGAG00000014263
Otolemur garnettii
ENSOGAG00000014263
I
0.906
ENSOPRG00000006675
Ochotona princeps
ENSOPRG00000006675
I
0.906
ANKHD1
Oryzias latipes
ENSORLG00000006908
I
0.906
ENSPPYG00000015854
Pongo pygmaeus
ENSPPYG00000015854
I
0.906
ENSOCUG00000015943
Oryctolagus cuniculus
ENSOCUG00000015943
I
0.906
ENSMUSG00000089986
Mus musculus
ENSMUSG00000089986
I
0.906
ENSMMUG00000019583
Macaca mulatta
ENSMMUG00000019583
I
0.906
ENSMODG00000011596
Monodelphis domestica
ENSMODG00000011596
I
0.906
Ankhd1
Mus musculus
ENSMUSG00000024483
I
0.906
XR_019937.1
Pan troglodytes
ENSPTRG00000017313
I
0.906
ENSPVAG00000009697
Pteropus vampyrus
ENSPVAG00000009697
I
0.906
ANKHD1
Tetraodon nigroviridis
ENSTNIG00000008996
I
0.906
ANKHD1
Takifugu rubripes
ENSTRUG00000001146
I
0.906
ENSTSYG00000003323
Tarsius syrichta
ENSTSYG00000003323
I
0.906
ENSTTRG00000005573
Tursiops truncatus
ENSTTRG00000005573
I
0.906
ANKHD1
Taeniopygia guttata
ENSTGUG00000001656
I
0.906
ENSSTOG00000001936
Spermophilus tridecemlineatus
ENSSTOG00000001936
I
0.906
Ankhd1-Eif4ebp3
Rattus norvegicus
ENSRNOG00000030247
I
0.906
ENSSARG00000007287
Sorex araneus
ENSSARG00000007287
I
0.906
ENSSSCG00000014364
Sus scrofa
ENSSSCG00000014364
I
0.906
ENSMLUG00000003126
Myotis lucifugus
ENSMLUG00000003126
I
0.906
ENSMICG00000000358
Microcebus murinus
ENSMICG00000000358
I
0.906
ENSCPOG00000019435
Cavia porcellus
ENSCPOG00000019435
I
0.906
ankhd1
Danio rerio
ENSDARG00000077860
I
0.906
LOC100072419
Equus caballus
ENSECAG00000015036
I
0.906
ENSETEG00000012639
Echinops telfairi
ENSETEG00000012639
I
0.906
ANKHD1
Callithrix jacchus
ENSCJAG00000016624
I
0.906
ENSCHOG00000005963
Choloepus hoffmanni
ENSCHOG00000005963
I
0.906
Ame_R000345
Ailuropoda melanoleuca
Ame_R000345
I
0.906
ENSACAG00000013168
Anolis carolinensis
ENSACAG00000013168
I
0.906
ENSCAFG00000005786
Canis familiaris
ENSCAFG00000005786
I
0.906
ankhd1
Xenopus tropicalis
ENSXETG00000018337
I
0.906
ENSFCAG00000001275
Felis catus
ENSFCAG00000001275
I
0.906
ENSGGOG00000000288
Gorilla gorilla
ENSGGOG00000000288
I
0.906
ENSLAFG00000005337
Loxodonta africana
ENSLAFG00000005337
I
0.906
SLC4A9
Meleagris gallopavo
ENSMGAG00000001068
I
0.906
ANKHD1
Gasterosteus aculeatus
ENSGACG00000018351
I
0.906
ANKHD1-EIF4EBP3
Gallus gallus
ENSGALG00000001099
I
0.906
ANKHD1
Homo sapiens
ENSG00000131503
D
0.906
ENSG00000249536
Homo sapiens
ENSG00000249536
I
0.906
ENSBTAG00000010871
Bos taurus
ENSBTAG00000010871
I
0.891
ENSDNOG00000014116
Dasypus novemcinctus
ENSDNOG00000014116
I
0.891
ENSPCAG00000016105
Procavia capensis
ENSPCAG00000016105
I
0.778
ENSMEUG00000013599
Macropus eugenii
ENSMEUG00000013599
I
0.778