CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.10.100.1
(
Phycomyces blakesleeanus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
e_gw1.10.100.1
T20728_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.10.100.1
KH
146
195
FVKRRQRLIGPNGSTLKAVELLTGCYMMVQGNTVSVMGPYKGLKDIRRIV
Links
Other
KH
family RBPs
Other
Phycomyces blakesleeanus
RBPs
145 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os03g26560
Oryza sativa
LOC_Os03g26560
N
0.000
LOC_Os04g19410
Oryza sativa
LOC_Os04g19410
N
0.000
LOC_Os04g29500
Oryza sativa
LOC_Os04g29500
N
0.000
LOC_Os05g17220
Oryza sativa
LOC_Os05g17220
N
0.000
LOC_Os05g17240
Oryza sativa
LOC_Os05g17240
N
0.000
LOC_Os05g39030
Oryza sativa
LOC_Os05g39030
N
0.000
LOC_Os09g04570
Oryza sativa
LOC_Os09g04570
N
0.000
LOC_Os12g14010
Oryza sativa
LOC_Os12g14010
N
0.000
LOC_Os12g18180
Oryza sativa
LOC_Os12g18180
N
0.000
LOC_Os12g25590
Oryza sativa
LOC_Os12g25590
N
0.000