LOC_Os12g18180 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os12g18180 T12530_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g18180.1 CCHC ZF 109 125
LOC_Os12g18180.1 CCHC ZF 281 297

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g33050 Oryza sativa LOC_Os03g33050 N 0.971
LOC_Os05g17240 Oryza sativa LOC_Os05g17240 N 0.914
LOC_Os05g39030 Oryza sativa LOC_Os05g39030 N 0.914
LOC_Os05g17220 Oryza sativa LOC_Os05g17220 N 0.914
LOC_Os09g04570 Oryza sativa LOC_Os09g04570 N 0.914
LOC_Os04g29500 Oryza sativa LOC_Os04g29500 N 0.914
LOC_Os03g26560 Oryza sativa LOC_Os03g26560 N 0.914
LOC_Os04g19410 Oryza sativa LOC_Os04g19410 N 0.912
LOC_Os12g14010 Oryza sativa LOC_Os12g14010 N 0.886
LOC_Os12g25590 Oryza sativa LOC_Os12g25590 N 0.886