CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Smp_115060
(
Schistosoma mansoni
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Smp_115060
T22006_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_115060
KH
69
118
FVKRRNRLIGHDGETLKALELSTNCYIVVQGKTVSVVGRYNDLKEVRKIV
Links
Other
KH
family RBPs
Other
Schistosoma mansoni
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A1A4J3_BOVIN
Bos taurus
ENSBTAG00000002116
N
0.000
Ame_R013957
Ailuropoda melanoleuca
Ame_R013957
N
0.000
ENSSSCG00000007207
Sus scrofa
ENSSSCG00000007207
N
0.000
LOC100068090
Equus caballus
ENSECAG00000001035
N
0.000
LOC100405106
Callithrix jacchus
ENSCJAG00000020839
N
0.000
ZCCHC3
Pan troglodytes
ENSPTRG00000013141
N
0.000
ZCCHC3
Pteropus vampyrus
ENSPVAG00000000182
N
0.000
Zcchc3
Rattus norvegicus
ENSRNOG00000007520
N
0.000
ZCCHC3
Sus scrofa
ENSSSCG00000007211
N
0.000
ZCCHC3
Spermophilus tridecemlineatus
ENSSTOG00000002945
N
0.000
ZCCHC3
Tursiops truncatus
ENSTTRG00000008511
N
0.000
ZCCHC3
Vicugna pacos
ENSVPAG00000011267
N
0.000
ZCCHC3
Ochotona princeps
ENSOPRG00000005081
N
0.000
ZCCHC3
Oryctolagus cuniculus
ENSOCUG00000017024
N
0.000
ZCCHC3
Cavia porcellus
ENSCPOG00000023974
N
0.000
ZCCHC3
Felis catus
ENSFCAG00000007934
N
0.000
ZCCHC3
Homo sapiens
ENSG00000177764
N
0.000
ZCCHC3
Loxodonta africana
ENSLAFG00000030593
N
0.000
ZCCHC3
Microcebus murinus
ENSMICG00000013474
N
0.000
ZCCHC3
Myotis lucifugus
ENSMLUG00000000191
N
0.000
ZCCHC3
Macaca mulatta
ENSMMUG00000005262
N
0.000
ZCCHC3
Canis familiaris
ENSCAFG00000025206
N
0.000
Zcchc3
Mus musculus
ENSMUSG00000074682
N
0.000