CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins

RBP Information

ZCCHC3 *(Spermophilus tridecemlineatus)* CCHC ZF
Pfam ID	Interpro ID	Gene ID	CISBP-RNA ID	Sequence source
PF00098 (zf-CCHC)	IPR001878	ENSSTOG00000002945	T10489_0.6	Ensembl (2011-Oct-26)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Sequence Logo	IUPAC	Type/Study/Study ID	RBD Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID	Species	Sequence Logo	IUPAC	Type/Study/Study ID	RBD Identity
No RBPs with similar RNA binding domains

Links
Other CCHC ZF family RBPs
Other *Spermophilus tridecemlineatus* RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name	Species	Gene ID	Motif Evidence	RBD Identity	Action
ZCCHC3	Ochotona princeps	ENSOPRG00000005081	N	1.000
LOC100405106	Callithrix jacchus	ENSCJAG00000020839	N	1.000
ZCCHC3	Oryctolagus cuniculus	ENSOCUG00000017024	N	0.981
Zcchc3	Mus musculus	ENSMUSG00000074682	N	0.981
ZCCHC3	Macaca mulatta	ENSMMUG00000005262	N	0.981
ZCCHC3	Sus scrofa	ENSSSCG00000007211	N	0.981
ZCCHC3	Pan troglodytes	ENSPTRG00000013141	N	0.981
Zcchc3	Rattus norvegicus	ENSRNOG00000007520	N	0.981
ZCCHC3	Pteropus vampyrus	ENSPVAG00000000182	N	0.981
ZCCHC3	Microcebus murinus	ENSMICG00000013474	N	0.981
ENSSSCG00000007207	Sus scrofa	ENSSSCG00000007207	N	0.981
ZCCHC3	Loxodonta africana	ENSLAFG00000030593	N	0.981
ZCCHC3	Canis familiaris	ENSCAFG00000025206	N	0.981
A1A4J3_BOVIN	Bos taurus	ENSBTAG00000002116	N	0.981
Ame_R013957	Ailuropoda melanoleuca	Ame_R013957	N	0.981
ZCCHC3	Vicugna pacos	ENSVPAG00000011267	N	0.981
ZCCHC3	Cavia porcellus	ENSCPOG00000023974	N	0.981
LOC100068090	Equus caballus	ENSECAG00000001035	N	0.981
ZCCHC3	Gorilla gorilla	ENSGGOG00000026181	N	0.981
ZCCHC3	Tursiops truncatus	ENSTTRG00000008511	N	0.981
ZCCHC3	Homo sapiens	ENSG00000177764	N	0.981
ZCCHC3	Felis catus	ENSFCAG00000007934	N	0.981
ZCCHC3	Myotis lucifugus	ENSMLUG00000000191	N	0.963