CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP1B
(
Tarsius syrichta
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSTSYG00000002037
T22878_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000001883
La
219
276
IRRQIEYYFSIENLERDFFLRRKMDEQGFLPVSLIAGFHRVQALTTNLHLILEALKDS
Links
Other
La
family RBPs
Other
Tarsius syrichta
RBPs
82 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH93491
Xenopus laevis
AAH93491
N
0.793
AAH98998
Xenopus laevis
AAH98998
N
0.759
AAI34816
Xenopus laevis
AAI34816
N
0.793
Ame_R005086
Ailuropoda melanoleuca
Ame_R005086
N
0.776
Ame_R010453
Ailuropoda melanoleuca
Ame_R010453
N
0.948
ENSDORG00000013445
Dipodomys ordii
ENSDORG00000013445
N
0.828
ENSGGOG00000006048
Gorilla gorilla
ENSGGOG00000006048
N
0.776
ENSGGOG00000024102
Gorilla gorilla
ENSGGOG00000024102
N
0.776
ENSLAFG00000008473
Loxodonta africana
ENSLAFG00000008473
N
0.948
estExt_fgenesh2_pg.C_20116
Branchiostoma floridae
estExt_fgenesh2_pg.C_20116
N
0.700
e_gw.711.10.1
Branchiostoma floridae
e_gw.711.10.1
N
0.700
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.776
LARP1
Tursiops truncatus
ENSTTRG00000015934
N
0.776
LARP1
Oryctolagus cuniculus
ENSOCUG00000013066
N
0.776
Larp1
Mus musculus
ENSMUSG00000037331
N
0.776
LARP1
Monodelphis domestica
ENSMODG00000008663
N
0.759
LARP1
Sus scrofa
ENSSSCG00000017069
N
0.776
LARP1
Macaca mulatta
ENSMMUG00000009411
N
0.776
LARP1
Myotis lucifugus
ENSMLUG00000002608
N
0.776
LARP1
Otolemur garnettii
ENSOGAG00000016750
N
0.776
LARP1
Ochotona princeps
ENSOPRG00000013014
N
0.776
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.776
LARP1
Tarsius syrichta
ENSTSYG00000013732
N
0.810
LARP1
Takifugu rubripes
ENSTRUG00000009470
N
0.810
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.776
LARP1
Spermophilus tridecemlineatus
ENSSTOG00000005678
N
0.776
LARP1
Sorex araneus
ENSSARG00000013907
N
0.707
Larp1
Rattus norvegicus
ENSRNOG00000031544
N
0.776
LARP1
Pteropus vampyrus
ENSPVAG00000002262
N
0.776
LARP1
Pan troglodytes
ENSPTRG00000017447
N
0.776
LARP1
Oryzias latipes
ENSORLG00000000824
N
0.828
LARP1
Microcebus murinus
ENSMICG00000000837
N
0.776
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.776
LARP1
Procavia capensis
ENSPCAG00000006407
N
0.776
larp1
Danio rerio
ENSDARG00000018434
N
0.828
LARP1
Cavia porcellus
ENSCPOG00000003377
N
0.776
LARP1
Equus caballus
ENSECAG00000017002
N
0.776
LARP1
Felis catus
ENSFCAG00000000592
N
0.776
Larp1
Dipodomys ordii
ENSDORG00000002897
N
0.776
LARP1
Echinops telfairi
ENSETEG00000020251
N
0.776
LARP1
Dasypus novemcinctus
ENSDNOG00000012073
N
0.776
LARP1
Homo sapiens
ENSG00000155506
N
0.776
LARP1
Bos taurus
ENSBTAG00000008443
N
0.776
LARP1
Loxodonta africana
ENSLAFG00000008991
N
0.776
LARP1
Canis familiaris
ENSCAFG00000017639
N
0.776
LARP1
Gallus gallus
ENSGALG00000004001
N
0.776
LARP1
Macropus eugenii
ENSMEUG00000002957
N
0.759
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.776
LARP1B
Tetraodon nigroviridis
ENSTNIG00000012398
N
0.810
LARP1B
Callithrix jacchus
ENSCJAG00000003338
N
0.914
LARP1B
Tupaia belangeri
ENSTBEG00000004177
N
0.862
LARP1B
Takifugu rubripes
ENSTRUG00000005612
N
0.776
LARP1B
Tursiops truncatus
ENSTTRG00000012984
N
0.948
LARP1B
Anolis carolinensis
ENSACAG00000011338
N
0.897
Larp1b
Mus musculus
ENSMUSG00000037814
N
0.931
LARP1B
Vicugna pacos
ENSVPAG00000007223
N
0.948
larp1b
Xenopus tropicalis
ENSXETG00000022512
N
0.776
LARP1B
Monodelphis domestica
ENSMODG00000012300
N
0.914
LARP1B
Canis familiaris
ENSCAFG00000003831
N
0.948
LARP1B
Bos taurus
ENSBTAG00000012135
N
0.948
LARP1B
Choloepus hoffmanni
ENSCHOG00000005354
N
0.931
LARP1B
Sus scrofa
ENSSSCG00000009073
N
0.931
LARP1B
Macaca mulatta
ENSMMUG00000021347
N
0.897
LARP1B
Gasterosteus aculeatus
ENSGACG00000004609
N
0.828
LARP1B
Homo sapiens
ENSG00000138709
N
0.897
LARP1B
Oryctolagus cuniculus
ENSOCUG00000013330
N
0.948
LARP1B
Otolemur garnettii
ENSOGAG00000005771
N
0.948
LARP1B
Ochotona princeps
ENSOPRG00000005478
N
0.931
LARP1B
Echinops telfairi
ENSETEG00000012497
N
0.862
LARP1B
Oryzias latipes
ENSORLG00000017954
N
0.810
LARP1B
Procavia capensis
ENSPCAG00000007546
N
0.948
LARP1B
Myotis lucifugus
ENSMLUG00000010229
N
0.948
LARP1B
Dasypus novemcinctus
ENSDNOG00000018765
N
0.931
Larp1b
Rattus norvegicus
ENSRNOG00000038366
N
0.948
LARP1B
Pteropus vampyrus
ENSPVAG00000005373
N
0.931
LARP1B
Meleagris gallopavo
ENSMGAG00000004809
N
0.810
LARP2
Gallus gallus
ENSGALG00000010207
N
0.862
LARP2
Taeniopygia guttata
ENSTGUG00000002098
N
0.845
LOC100071865
Equus caballus
ENSECAG00000001088
N
0.948
LOC100393482
Callithrix jacchus
ENSCJAG00000004454
N
0.776
LOC742664
Pan troglodytes
ENSPTRG00000016437
N
0.897
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.724