CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RBCK1
(
Gasterosteus aculeatus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSGACG00000006056
T26481_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000008018
RanBP ZF
103
132
PQMRWSCPICTFLNKPTRPGCEMCGEDRPD
Links
Other
RanBP ZF
family RBPs
Other
Gasterosteus aculeatus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R008231
Ailuropoda melanoleuca
Ame_R008231
N
0.000
D9ZBB1_RABIT
Oryctolagus cuniculus
ENSOCUG00000012411
N
0.000
ENSPPYG00000000582
Pongo pygmaeus
ENSPPYG00000000582
N
0.000
LOC100058796
Equus caballus
ENSECAG00000008744
N
0.000
UHMK1
Tupaia belangeri
ENSTBEG00000017334
N
0.000
UHMK1
Vicugna pacos
ENSVPAG00000010726
N
0.000
UHMK1
Otolemur garnettii
ENSOGAG00000016110
N
0.000
UHMK1
Ochotona princeps
ENSOPRG00000001881
N
0.000
UHMK1
Oryzias latipes
ENSORLG00000014340
N
0.000
UHMK1
Procavia capensis
ENSPCAG00000000531
N
0.000
UHMK1
Tarsius syrichta
ENSTSYG00000011273
N
0.000
UHMK1
Pan troglodytes
ENSPTRG00000001601
N
0.000
UHMK1
Taeniopygia guttata
ENSTGUG00000017148
N
0.000
UHMK1
Pteropus vampyrus
ENSPVAG00000002624
N
0.000
Uhmk1
Rattus norvegicus
ENSRNOG00000002941
N
0.000
UHMK1
Spermophilus tridecemlineatus
ENSSTOG00000004265
N
0.000
Uhmk1
Mus musculus
ENSMUSG00000026667
N
0.000
UHMK1
Bos taurus
ENSBTAG00000012694
N
0.000
UHMK1
Macaca mulatta
ENSMMUG00000019513
N
0.000
UHMK1
Canis familiaris
ENSCAFG00000013095
N
0.000
UHMK1
Choloepus hoffmanni
ENSCHOG00000011101
N
0.000
UHMK1
Callithrix jacchus
ENSCJAG00000004291
N
0.000
UHMK1
Cavia porcellus
ENSCPOG00000004561
N
0.000
uhmk1
Danio rerio
ENSDARG00000059575
N
0.000
UHMK1
Dasypus novemcinctus
ENSDNOG00000009922
N
0.000
Uhmk1
Dipodomys ordii
ENSDORG00000011233
N
0.000
UHMK1
Erinaceus europaeus
ENSEEUG00000011231
N
0.000
UHMK1
Felis catus
ENSFCAG00000014123
N
0.000
UHMK1
Homo sapiens
ENSG00000152332
N
0.000
UHMK1
Gasterosteus aculeatus
ENSGACG00000003529
N
0.000
UHMK1
Gallus gallus
ENSGALG00000002734
N
0.000
UHMK1
Gorilla gorilla
ENSGGOG00000002032
N
0.000
UHMK1
Loxodonta africana
ENSLAFG00000007405
N
0.000
XM_001363163.1
Monodelphis domestica
ENSMODG00000001048
N
0.000