CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UHMK1
(
Gasterosteus aculeatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGACG00000003529
T37411_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000004623
RRM
344
400
LEDMKEECQKYGSVVSLLIPKENPGKGQVFVEYANSSDSKEAQRLLTGRTFDGKFVV
Links
Other
RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
UHMK1
Oryzias latipes
ENSORLG00000014340
N
0.982
uhmk1
Danio rerio
ENSDARG00000059575
N
0.930
UHMK1
Pteropus vampyrus
ENSPVAG00000002624
N
0.842
UHMK1
Tarsius syrichta
ENSTSYG00000011273
N
0.825
UHMK1
Choloepus hoffmanni
ENSCHOG00000011101
N
0.825
UHMK1
Canis familiaris
ENSCAFG00000013095
N
0.825
UHMK1
Bos taurus
ENSBTAG00000012694
N
0.825
UHMK1
Vicugna pacos
ENSVPAG00000010726
N
0.825
Ame_R008231
Ailuropoda melanoleuca
Ame_R008231
N
0.825
UHMK1
Cavia porcellus
ENSCPOG00000004561
N
0.825
UHMK1
Erinaceus europaeus
ENSEEUG00000011231
N
0.825
UHMK1
Felis catus
ENSFCAG00000014123
N
0.825
UHMK1
Homo sapiens
ENSG00000152332
N
0.825
LOC100058796
Equus caballus
ENSECAG00000008744
N
0.825
Uhmk1
Dipodomys ordii
ENSDORG00000011233
N
0.825
UHMK1
Taeniopygia guttata
ENSTGUG00000017148
N
0.825
UHMK1
Dasypus novemcinctus
ENSDNOG00000009922
N
0.825
UHMK1
Callithrix jacchus
ENSCJAG00000004291
N
0.825
UHMK1
Spermophilus tridecemlineatus
ENSSTOG00000004265
N
0.825
Uhmk1
Mus musculus
ENSMUSG00000026667
N
0.825
D9ZBB1_RABIT
Oryctolagus cuniculus
ENSOCUG00000012411
N
0.825
XM_001363163.1
Monodelphis domestica
ENSMODG00000001048
N
0.825
UHMK1
Macaca mulatta
ENSMMUG00000019513
N
0.825
UHMK1
Meleagris gallopavo
ENSMGAG00000005043
N
0.825
UHMK1
Tupaia belangeri
ENSTBEG00000017334
N
0.825
UHMK1
Ochotona princeps
ENSOPRG00000001881
N
0.825
Uhmk1
Rattus norvegicus
ENSRNOG00000002941
N
0.825
UHMK1
Gallus gallus
ENSGALG00000002734
N
0.825
UHMK1
Pan troglodytes
ENSPTRG00000001601
N
0.825
ENSPPYG00000000582
Pongo pygmaeus
ENSPPYG00000000582
N
0.825
UHMK1
Gorilla gorilla
ENSGGOG00000002032
N
0.825
UHMK1
Loxodonta africana
ENSLAFG00000007405
N
0.807
UHMK1
Otolemur garnettii
ENSOGAG00000016110
N
0.807
UHMK1
Procavia capensis
ENSPCAG00000000531
N
0.807