CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GL10466
(
Drosophila persimilis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
FBgn0148076
T26965_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0174573
RanBP ZF
23
49
SPGDWICPDYDCRHLNFARRTQCNKCN
FBpp0174573
RanBP ZF
97
126
SAEDWQCAKCANVNWARRQTCNMCNSPKFT
Links
Other
RanBP ZF
family RBPs
Other
Drosophila persimilis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG3732
Drosophila melanogaster
FBgn0034750
N
0.867
GA17648-RA
Drosophila pseudoobscura
FBgn0077659
N
1.000
GD25119
Drosophila simulans
FBgn0196431
N
0.867
GE11855
Drosophila yakuba
FBgn0229641
N
0.867
GF13007
Drosophila ananassae
FBgn0090040
N
0.850
GG21779
Drosophila erecta
FBgn0113957
N
0.867
GH20335
Drosophila grimshawi
FBgn0127799
N
0.823
GI20006
Drosophila mojavensis
FBgn0142742
N
0.823
GJ21255
Drosophila virilis
FBgn0208388
N
0.823
GK17903
Drosophila willistoni
FBgn0219902
N
0.860