POPTR_0013s06350 (Populus trichocarpa)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 POPTR_0013s06350 T27094_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0013s06350.1 RanBP ZF 1 18
POPTR_0013s06350.1 RanBP ZF 22 51

Links

Other RanBP ZF family RBPs
Other Populus trichocarpa RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29818.m000389 Ricinus communis 29818.m000389 N 0.717
cassava12379.valid.m1 Manihot esculenta cassava12379.valid.m1 N 0.717
GSVIVG00029939001 Vitis vinifera GSVIVG00029939001 N 0.700
MDP0000224484 Malus x domestica MDP0000224484 N 0.700
MDP0000688583 Malus x domestica MDP0000688583 N 0.837
Medtr7g103850 Medicago truncatula Medtr7g103850 N 0.700
ppa001151m Prunus persica ppa001151m N 0.733