GSVIVG00029939001 (Vitis vinifera)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 GSVIVG00029939001 T27037_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00029939001 RanBP ZF 272 301
GSVIVT00029939001 RanBP ZF 305 334

Links

Other RanBP ZF family RBPs
Other Vitis vinifera RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29818.m000389 Ricinus communis 29818.m000389 N 0.950
cassava12379.valid.m1 Manihot esculenta cassava12379.valid.m1 N 0.917
ppa001151m Prunus persica ppa001151m N 0.917
Medtr7g103850 Medicago truncatula Medtr7g103850 N 0.917
Glyma19g29710.1 Glycine max Glyma19g29710.1 N 0.902
LjT26C04.50.nd Lotus japonicus LjT26C04.50.nd N 0.900
Cucsa.337020 Cucumis sativus Cucsa.337020 N 0.885
MDP0000224484 Malus x domestica MDP0000224484 N 0.883
PK08935.1 Cannabis sativa PK08935.1 N 0.883
Glyma03g00950.1 Glycine max Glyma03g00950.1 N 0.869
BRADI2G53210 Brachypodium distachyon BRADI2G53210 N 0.850
GRMZM2G312244 Zea mays GRMZM2G312244 N 0.800
LOC_Os01g59980 Oryza sativa LOC_Os01g59980 N 0.800
GRMZM2G069106 Zea mays GRMZM2G069106 N 0.800
SB03G037900 Sorghum bicolor Sb03g037900 N 0.800
VAR3 Arabidopsis thaliana AT5G17790-TAIR-G N 0.770
XM_002873808.1 Arabidopsis lyrata Al_scaffold_0006_1692 N 0.754
MDP0000688583 Malus x domestica MDP0000688583 N 0.705
POPTR_0013s06350 Populus trichocarpa POPTR_0013s06350 N 0.700