CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_01236
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_01236
T29799_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_01236T0
RRM
30
79
TVSPSFNKQDIEEHFGSHGTGKITEIKLMQGFGFIEYEDAMDAKDVVPGE
MGYG_01236T0
RRM
174
236
ITGLPETSWQDLKDFARQSGLDVVYSETRDRDGKGFVEFENGNDLRTAVEKLDGTDFKGSRVT
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MCYG_00727
Microsporum canis
MCYG_00727
N
0.941
TEQG_05050
Trichophyton equinum
TEQG_05050
N
0.820
TESG_02526
Trichophyton tonsurans
TESG_02526
N
0.855