An09g06700 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00008209 T33562_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00008064 RRM 368 430

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_000920 Aspergillus clavatus CADACLAG00000330 N 0.937
AFLA_007030 Aspergillus flavus CADAFLAG00010766 N 0.952
AFUA_5G04240 Aspergillus fumigatus CADAFUAG00002869 N 0.905
ANIA_08276 Aspergillus nidulans CADANIAG00004336 N 0.889
AO090102000629 Aspergillus oryzae CADAORAG00009913 N 0.952
ARB_07074 Arthroderma benhamiae ARB_07074 N 0.778
ATEG_07989 Aspergillus terreus CADATEAG00005162 N 0.921
BDBG_05846 Blastomyces dermatitidis BDBG_05846 N 0.841
CIMG_06293 Coccidioides immitis CIMG_06293 N 0.841
CPSG_00779 Coccidioides posadasii CPSG_00779 N 0.841
fgenesh1_pg.00153_#_263 Aspergillus carbonarius fgenesh1_pg.00153_#_263 N 0.968
HCAG_11161 Histoplasma capsulatum HCAG_11161 N 0.825
MCYG_06836 Microsporum canis MCYG_06836 N 0.810
MGYG_03781 Microsporum gypseum MGYG_03781 N 0.794
NFIA_037860 Neosartorya fischeri CADNFIAG00003716 N 0.952
PABG_07318 Paracoccidioides brasiliensis PABG_07318 N 0.841
Pc12g05410 Penicillium chrysogenum Pc12g05410 N 0.857
PMAA_095320 Penicillium marneffei PMAA_095320 N 0.762
TEQG_02925 Trichophyton equinum TEQG_02925 N 0.778
TERG_04128 Trichophyton rubrum TERG_04128 N 0.778
TRV_04696 Trichophyton verrucosum TRV_04696 N 0.778
UREG_04091 Uncinocarpus reesii UREG_04091 N 0.825