An15g06790 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00012358 T33580_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00012124 RRM 82 149

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB04189.1 Alternaria brassicicola AB04189.1 N 0.765
ACLA_075320 Aspergillus clavatus CADACLAG00006833 N 0.912
AFLA_003440 Aspergillus flavus CADAFLAG00010410 N 0.926
AFUA_2G16400 Aspergillus fumigatus CADAFUAG00004230 N 0.868
ANIA_07350 Aspergillus nidulans CADANIAG00000083 N 0.941
AO090102000222 Aspergillus oryzae CADAORAG00009578 N 0.926
ARB_03225 Arthroderma benhamiae ARB_03225 N 0.750
ATEG_02298 Aspergillus terreus CADATEAG00000182 N 0.941
BDBG_02754 Blastomyces dermatitidis BDBG_02754 N 0.750
CIMG_09493 Coccidioides immitis CIMG_09493 N 0.750
CPSG_04053 Coccidioides posadasii CPSG_04053 N 0.765
EAT82319.2 Phaeosphaeria nodorum EAT82319.2 N 0.735
estExt_fgenesh1_pg.C_180055 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_180055 N 0.750
fgenesh1_pg.00815_#_18 Aspergillus carbonarius fgenesh1_pg.00815_#_18 N 0.941
HCAG_06478 Histoplasma capsulatum HCAG_06478 N 0.779
MCYG_03836 Microsporum canis MCYG_03836 N 0.735
MGYG_07815 Microsporum gypseum MGYG_07815 N 0.735
NFIA_091670 Neosartorya fischeri CADNFIAG00006889 N 0.897
PABG_02641 Paracoccidioides brasiliensis PABG_02641 N 0.721
Pc21g01490 Penicillium chrysogenum Pc21g01490 N 0.797
PMAA_034530 Penicillium marneffei PMAA_034530 N 0.779
PTRG_05566 Pyrenophora tritici repentis PTRG_05566 N 0.750
SNOG_09984 Stagonospora nodorum SNOG_09984 N 0.735
TEQG_03246 Trichophyton equinum TEQG_03246 N 0.750
TERG_05285 Trichophyton rubrum TERG_05285 N 0.750
TESG_04321 Trichophyton tonsurans TESG_04321 N 0.750
TRV_02454 Trichophyton verrucosum TRV_02454 N 0.735
UREG_04821 Uncinocarpus reesii UREG_04821 N 0.765