CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ003738
(
Culex quinquefasciatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CPIJ003738
T34227_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ003738-PA
RRM
181
245
VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMTGTNRGYAFVTFTSRDAACNAVREVWGCDI
CPIJ003738-PA
RRM
267
329
LYVRNLTQDTSEEKLKESFEAFGKVERVKKIKDYAFVHFEDRDHAVNAMKDLDGKDINGSAIE
Links
Other
RRM
family RBPs
Other
Culex quinquefasciatus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BGIBMGA006260
Bombyx mori
BGIBMGA006260
N
0.773
CpipJ_CPIJ003738
Culex pipiens
CpipJ_CPIJ003738
N
1.000