CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIBMGA006260
(
Bombyx mori
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BGIBMGA006260
T54992_0.6
SilkDB (2008-Apr-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA006260
RRM
137
197
VFCGKIPKDMYEDELIPLFERCGTIWDLRLMMDPMTGANRGYAFVTFTTRDATQRAVHEVK
BGIBMGA006260
RRM
199
261
LYVRNLTQDITEEALKEEFEHYGNVERVKKIKDYAFVHFDDRDCAVKAMQELDGKDLGGSRLE
Links
Other
RRM
family RBPs
Other
Bombyx mori
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ003738
Culex quinquefasciatus
CPIJ003738
N
0.773
CpipJ_CPIJ003738
Culex pipiens
CpipJ_CPIJ003738
N
0.773