RBM46 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000004237 T42223_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.765
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000010035 RRM 47 116
ENSTRUP00000010035 RRM 127 193
ENSTRUP00000010035 RRM 222 286
ENSTRUP00000010036 RRM 47 116
ENSTRUP00000010036 RRM 127 193
ENSTRUP00000010036 RRM 222 286
ENSTRUP00000010037 RRM 40 109
ENSTRUP00000010037 RRM 120 186
ENSTRUP00000010037 RRM 215 279
ENSTRUP00000010038 RRM 40 109
ENSTRUP00000010038 RRM 120 186
ENSTRUP00000010038 RRM 215 279

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.761
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.746
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.717
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.756
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.761
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.761
RBM46 Oryzias latipes ENSORLG00000002429 I 0.793
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.756
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.706
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.761
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.761
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.761
RBM46 Sorex araneus ENSSARG00000006520 I 0.761
RBM46 Sus scrofa ENSSSCG00000008994 I 0.761
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.746
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.725
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.926
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.756
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.761
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.761
Rbm46 Mus musculus ENSMUSG00000033882 I 0.766
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.761
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.761
RBM46 Canis familiaris ENSCAFG00000008473 I 0.761
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.761
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.756
rbm46 Danio rerio ENSDARG00000079452 I 0.771
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.761
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.727
RBM46 Equus caballus ENSECAG00000007649 I 0.766
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.737
RBM46 Echinops telfairi ENSETEG00000014902 I 0.761
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.756
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.756
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.766
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.761
RBM46 Gallus gallus ENSGALG00000009278 I 0.716
RBM46 Homo sapiens ENSG00000151962 D 0.761
RBM46 Felis catus ENSFCAG00000009246 I 0.751
RBM46 Bos taurus ENSBTAG00000001696 I 0.766
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.716