RBM46_XENTR (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000022412 T42944_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.837
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000050765 RRM 59 127
ENSXETP00000050765 RRM 139 213
ENSXETP00000050765 RRM 234 298

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.837
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.828
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.799
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.837
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.837
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.837
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.761
RBM46 Oryzias latipes ENSORLG00000002429 I 0.706
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.837
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.837
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.823
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.837
RBM46 Sorex araneus ENSSARG00000006520 I 0.837
RBM46 Sus scrofa ENSSSCG00000008994 I 0.837
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.823
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.794
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.706
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.716
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.833
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.828
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.837
Rbm46 Mus musculus ENSMUSG00000033882 I 0.833
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.837
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.837
RBM46 Canis familiaris ENSCAFG00000008473 I 0.837
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.837
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.842
rbm46 Danio rerio ENSDARG00000079452 I 0.732
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.828
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.804
RBM46 Equus caballus ENSECAG00000007649 I 0.833
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.813
RBM46 Echinops telfairi ENSETEG00000014902 I 0.837
RBM46 Felis catus ENSFCAG00000009246 I 0.828
RBM46 Homo sapiens ENSG00000151962 D 0.837
RBM46 Gallus gallus ENSGALG00000009278 I 0.767
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.837
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.837
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.833
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.833
RBM46 Bos taurus ENSBTAG00000001696 I 0.837