CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LbrM30_V2.1230
(
Leishmania braziliensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
LbrM30_V2.1230
T46877_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LbrM30_V2.1230
RRM
15
72
PAFHSRSMLCRAFWPFGRVMEISIHDGKSYAFVHLRRTEEAKAAVDALMESRELGAAI
LbrM30_V2.1230
RRM
159
222
LWVGNLVPYITNEKLTEVFEVFGPISSVSRLGRSNMAFLHYETVEQCTMAIETMKGRPIEGVML
LbrM30_V2.1230
RRM
275
339
IYLGHLPADAEAKDVEDLFTPYDGFIFSKFVGTSGIGFGHFDTIESSRLARAGLSNAMIKGTPIR
Links
Other
RRM
family RBPs
Other
Leishmania braziliensis
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LinJ30_V3.1170
Leishmania infantum
LinJ30_V3.1170
N
0.957
LmjF30.1110
Leishmania major
LmjF30.1110
N
0.952
LmxM29.1110
Leishmania mexicana
LmxM29.1110
N
0.936