cassava23502.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava23502.valid.m1 T49202_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava23502.valid.m1 RRM 356 426
cassava23502.valid.m1 RRM 436 508
cassava23502.valid.m1 RRM 534 604

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
28623.m000403 Ricinus communis 28623.m000403 N 0.916
B9HFJ8_POPTR Populus trichocarpa POPTR_0007s13940 N 0.860
B9MXI3_POPTR Populus trichocarpa POPTR_0005s11850 N 0.856
Glyma02g05590.1 Glycine max Glyma02g05590.1 N 0.772
Glyma16g24150.1 Glycine max Glyma16g24150.1 N 0.814
GSVIVG00018805001 Vitis vinifera GSVIVG00018805001 N 0.847
MDP0000281863 Malus x domestica MDP0000281863 N 0.763
MDP0000303270 Malus x domestica MDP0000303270 N 0.758
Medtr8g090220 Medicago truncatula Medtr8g090220 N 0.795
PK10067.1 Cannabis sativa PK10067.1 N 0.763
ppa015681m Prunus persica ppa015681m N 0.805