Medtr8g090220 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr8g090220 T54608_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr8g090220.1 RRM 420 490
Medtr8g090220.1 RRM 500 572
Medtr8g090220.1 RRM 598 668

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma16g24150.1 Glycine max Glyma16g24150.1 N 0.865
Glyma02g05590.1 Glycine max Glyma02g05590.1 N 0.814
GSVIVG00018805001 Vitis vinifera GSVIVG00018805001 N 0.805
cassava23502.valid.m1 Manihot esculenta cassava23502.valid.m1 N 0.795
B9HFJ8_POPTR Populus trichocarpa POPTR_0007s13940 N 0.786
B9MXI3_POPTR Populus trichocarpa POPTR_0005s11850 N 0.772
ppa015681m Prunus persica ppa015681m N 0.772
28623.m000403 Ricinus communis 28623.m000403 N 0.767
MDP0000281863 Malus x domestica MDP0000281863 N 0.730
MDP0000303270 Malus x domestica MDP0000303270 N 0.721
PK10067.1 Cannabis sativa PK10067.1 N 0.721