CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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mgf008467m
(
Mimulus guttatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
mgf008467m
T53658_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf008467m
RRM
290
352
EGEVAEECTKFGKVTRVLIFEITEANFPHEEAVRIFIQFEKSEQATKALIELEGRFFGGRVVH
Links
Other
RRM
family RBPs
Other
Mimulus guttatus
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSLAFG00000028496
Loxodonta africana
ENSLAFG00000028496
N
0.000
ENSPCAG00000003709
Procavia capensis
ENSPCAG00000003709
N
0.000
estExt_fgenesh2_pm.C_220017
Branchiostoma floridae
estExt_fgenesh2_pm.C_220017
N
0.000
e_gw.526.41.1
Branchiostoma floridae
e_gw.526.41.1
N
0.000
e_gw1.2.1173.1
Trichoplax adhaerens
e_gw1.2.1173.1
N
0.000
XP_001189425.1
Strongylocentrotus purpuratus
XP_001189425.1
N
0.000