estExt_fgenesh2_pm.C_220017 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh2_pm.C_220017 T50939_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pm.C_220017 RRM 204 226
estExt_fgenesh2_pm.C_220017 RRM 232 278
estExt_fgenesh2_pm.C_220017 RRM 321 391
estExt_fgenesh2_pm.C_220017 RRM 448 509

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.526.41.1 Branchiostoma floridae e_gw.526.41.1 N 0.995
XP_792919.2 Strongylocentrotus purpuratus XP_792919.2 N 0.803
XP_001189425.1 Strongylocentrotus purpuratus XP_001189425.1 N 0.803
ENSLAFG00000028496 Loxodonta africana ENSLAFG00000028496 N 0.788
ENSPCAG00000003709 Procavia capensis ENSPCAG00000003709 N 0.764
WUBG_04401 Wuchereria bancrofti WUBG_04401 N 0.752
Bm1_09760 Brugia malayi Bm1_09760 N 0.752
Ppa-uaf-1 Pristionchus pacificus PPA25373 N 0.743
e_gw1.2.1173.1 Trichoplax adhaerens e_gw1.2.1173.1 N 0.739
uaf-1 Caenorhabditis elegans Y92C3B.2 N 0.733
CBN25972 Caenorhabditis brenneri CBN25972 N 0.722
CRE16190 Caenorhabditis remanei CRE16190 N 0.718
Minc05098 Meloidogyne incognita Minc05098 N 0.707