CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
mgf014593m
(
Mimulus guttatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
mgf014593m
T53739_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf014593m
RRM
6
72
VKVSNLSLGASDRDIQEFFSFSGDIQYVETRSDTERSQIAFVTFKDAQGAETAILLSGATIVDMAVE
Links
Other
RRM
family RBPs
Other
Mimulus guttatus
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AKAP17A
Anolis carolinensis
ENSACAG00000005956
N
0.000
AKAP17A
Tetraodon nigroviridis
ENSTNIG00000016428
N
0.000
LOC100391823
Callithrix jacchus
ENSCJAG00000004065
N
0.000
SFRS17A
Gallus gallus
ENSGALG00000016686
N
0.000
SFRS17A
Taeniopygia guttata
ENSTGUG00000010729
N
0.000
XM_001362178.1
Monodelphis domestica
ENSMODG00000000082
N
0.000