CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GRMZM2G133308
(
Zea mays
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GRMZM2G133308
T54143_0.6
MaizeSequence (2009-Oct-16)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G133308_P01
RRM
431
504
LYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRTDGQAAKDEMQGVIVYDYELK
GRMZM2G133308_P02
RRM
431
504
LYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRTDGQAAKDEMQGVIVYDYELK
Links
Other
RRM
family RBPs
Other
Zea mays
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCING00000010611
Ciona intestinalis
ENSCING00000010611
N
0.000
fgenesh2_kg.10_#_112_#_0_0_FS3H43Z04IKC5M_CFOT
Serpula lacrymans
fgenesh2_kg.10_#_112_#_0_0_FS3H43Z04IKC5M_CFOT
N
0.000
fgenesh2_kg.12_#_635_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.12_#_635_#_11486_1_CFPN
N
0.000
fgenesh2_kg.12_#_754_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.12_#_754_#_11486_1_CFPN
N
0.000
fgenesh2_kg.14_#_548_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.14_#_548_#_11486_1_CFPN
N
0.000
fgenesh2_kg.15_#_627_#_0_0_FS3H43Z04IKC5M_CFOT
Serpula lacrymans
fgenesh2_kg.15_#_627_#_0_0_FS3H43Z04IKC5M_CFOT
N
0.000
fgenesh2_kg.17_#_294_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.17_#_294_#_11486_1_CFPN
N
0.000
fgenesh2_kg.18_#_121_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.18_#_121_#_11486_1_CFPN
N
0.000
fgenesh2_kg.20_#_21_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.20_#_21_#_11486_1_CFPN
N
0.000
fgenesh2_kg.2_#_2458_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.2_#_2458_#_11486_1_CFPN
N
0.000
fgenesh2_kg.2_#_266_#_0_0_FS3H43Z04IKC5M_CFOT
Serpula lacrymans
fgenesh2_kg.2_#_266_#_0_0_FS3H43Z04IKC5M_CFOT
N
0.000
fgenesh2_kg.3_#_1118_#_0_0_FS3H43Z04IKC5M_CFOT
Serpula lacrymans
fgenesh2_kg.3_#_1118_#_0_0_FS3H43Z04IKC5M_CFOT
N
0.000
fgenesh2_kg.4_#_2144_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_2144_#_11486_1_CFPN
N
0.000
fgenesh2_kg.4_#_2864_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_2864_#_11486_1_CFPN
N
0.000
fgenesh2_kg.5_#_1694_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.5_#_1694_#_11486_1_CFPN
N
0.000
fgenesh2_kg.5_#_495_#_0_0_FS3H43Z04IKC5M_CFOT
Serpula lacrymans
fgenesh2_kg.5_#_495_#_0_0_FS3H43Z04IKC5M_CFOT
N
0.000
fgenesh2_kg.6_#_1126_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.6_#_1126_#_11486_1_CFPN
N
0.000
fgenesh2_kg.7_#_2034_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.7_#_2034_#_11486_1_CFPN
N
0.000
fgenesh2_kg.7_#_456_#_0_0_FS3H43Z04IKC5M_CFOT
Serpula lacrymans
fgenesh2_kg.7_#_456_#_0_0_FS3H43Z04IKC5M_CFOT
N
0.000
fgenesh2_kg.8_#_1276_#_0_0_FS3H43Z04IKC5M_CFOT
Serpula lacrymans
fgenesh2_kg.8_#_1276_#_0_0_FS3H43Z04IKC5M_CFOT
N
0.000
fgenesh2_kg.8_#_1578_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.8_#_1578_#_11486_1_CFPN
N
0.000
fgenesh2_kg.9_#_513_#_11486_1_CFPN
Serpula lacrymans
fgenesh2_kg.9_#_513_#_11486_1_CFPN
N
0.000
K08D12.3
Caenorhabditis elegans
K08D12.3
N
0.000