Pdcd11 (Mus musculus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 ENSMUSG00000025047 T60453_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000072008 S1 80 134
ENSMUSP00000072008 S1 183 258
ENSMUSP00000072008 S1 279 346
ENSMUSP00000072008 S1 449 522
ENSMUSP00000072008 S1 541 611
ENSMUSP00000072008 S1 632 692
ENSMUSP00000072008 S1 725 798
ENSMUSP00000072008 S1 1043 1115
ENSMUSP00000072008 S1 1170 1233
ENSMUSP00000072008 S1 1237 1302
ENSMUSP00000078020 S1 55 128
ENSMUSP00000078020 S1 147 217
ENSMUSP00000078020 S1 238 298
ENSMUSP00000078020 S1 331 404
ENSMUSP00000078020 S1 649 721

Links

Other S1 family RBPs
Other Mus musculus RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100397686 Callithrix jacchus ENSCJAG00000018257 N 0.804
PDCD11 Cavia porcellus ENSCPOG00000010957 N 0.793
Pdcd11 Rattus norvegicus ENSRNOG00000020304 N 0.911
Q6X9W2_HORSE Equus caballus ENSECAG00000020507 N 0.817