LOC100397686 (Callithrix jacchus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 ENSCJAG00000018257 T60296_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000033833 S1 1 71
ENSCJAP00000033833 S1 91 159
ENSCJAP00000033833 S1 262 335
ENSCJAP00000033833 S1 353 424
ENSCJAP00000033833 S1 445 503
ENSCJAP00000033833 S1 538 611
ENSCJAP00000033833 S1 845 913
ENSCJAP00000033833 S1 959 1035
ENSCJAP00000033833 S1 1039 1111
ENSCJAP00000033849 S1 80 134
ENSCJAP00000033849 S1 183 258
ENSCJAP00000033849 S1 278 346
ENSCJAP00000033849 S1 449 522
ENSCJAP00000033849 S1 540 611
ENSCJAP00000033849 S1 632 690
ENSCJAP00000033849 S1 725 798
ENSCJAP00000033849 S1 1032 1100
ENSCJAP00000033849 S1 1146 1222
ENSCJAP00000033849 S1 1226 1298

Links

Other S1 family RBPs
Other Callithrix jacchus RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q6X9W2_HORSE Equus caballus ENSECAG00000020507 N 0.880
PDCD11 Felis catus ENSFCAG00000002384 N 0.854
PDCD11 Cavia porcellus ENSCPOG00000010957 N 0.819
Pdcd11 Rattus norvegicus ENSRNOG00000020304 N 0.807
Pdcd11 Mus musculus ENSMUSG00000025047 N 0.804
PDCD11 Macaca mulatta ENSMMUG00000007058 N 0.755
PDCD11 Homo sapiens ENSG00000148843 N 0.747
PDCD11 Pan troglodytes ENSPTRG00000002911 N 0.746
PDCD11 Gorilla gorilla ENSGGOG00000011621 N 0.743
PDCD11 Oryctolagus cuniculus ENSOCUG00000006312 N 0.705