B9IAB2_POPTR (Populus trichocarpa)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 POPTR_0014s14580 T60748_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s14580.1 S1 117 195
POPTR_0014s14580.1 S1 206 284

Links

Other S1 family RBPs
Other Populus trichocarpa RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G23700 Arabidopsis thaliana AT3G23700-TAIR-G N 0.717
cassava24038.valid.m1 Manihot esculenta cassava24038.valid.m1 N 0.792
Cucsa.094980 Cucumis sativus Cucsa.094980 N 0.736
Glyma18g00740.1 Glycine max Glyma18g00740.1 N 0.704
GSVIVG00031632001 Vitis vinifera GSVIVG00031632001 N 0.781
mgf012420m Mimulus guttatus mgf012420m N 0.738
ppa009736m Prunus persica ppa009736m N 0.723
XM_002885542.1 Arabidopsis lyrata fgenesh2_kg.3__2587__AT3G23700.1 N 0.717