CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ythdf2
(
Xenopus tropicalis
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSXETG00000020636
T62174_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000044586
YTH
374
464
LLFSVNGSGHFCGVAEMRSAVDYNTCAGVWSQDKWKGRFDVRWLFVKDVPNGQLRHIRLENNDNKPVTNSRDTQEVPLEKARQVLRIIASY
Links
Other
YTH
family RBPs
Other
Xenopus tropicalis
RBPs
158 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
9187_YGR250C
Saccharomyces mikatae
9187_YGR250C
N
0.000
9299_YGR250C
Saccharomyces paradoxus
9299_YGR250C
N
0.000
Skud_Contig1999.8
Saccharomyces kudriavzevii
Skud_Contig1999.8
N
0.000