MDP0000275117 (Malus x domestica)
CCCH ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00013 (KH_1) 		IPR000571
IPR018111 		MDP0000275117 T00227_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000275117 CCCH ZF 135 148
MDP0000275117 CCCH ZF 190 215
MDP0000275117 KH 261 323
MDP0000275117 CCCH ZF 353 378

Links

Other CCCH ZF,KH family RBPs
Other Malus x domestica RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_15719 Puccinia graminis PGTG_15719 N 0.000
PGTG_18170 Puccinia graminis PGTG_18170 N 0.000
PTTG_05083 Puccinia triticina PTTG_05083 N 0.000
e_gw1.3.686.1 Sporobolomyces roseus e_gw1.3.686.1 N 0.000