CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BRADI4G44040
(
Brachypodium distachyon
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
BRADI4G44040
T00406_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G44040.1
CCCH ZF
134
155
KPCLYYARGFCKNGGSCRFVHG
BRADI4G44040.1
RRM
264
323
DSTFSEEDVSSYFSMYGPVQDVRIPYQQKRMFGFVTFVYAETVRLILAKGNPHFVCDARV
Links
Other
CCCH ZF,RRM
family RBPs
Other
Brachypodium distachyon
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSETEG00000012394
Echinops telfairi
ENSETEG00000012394
N
0.000