estExt_Genewise1Plus.C_110210 (Phytophthora capsici)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		estExt_Genewise1Plus.C_110210 T01071_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_110210 RRM 13 83
estExt_Genewise1Plus.C_110210 RRM 119 188
estExt_Genewise1Plus.C_110210 CCCH ZF 210 234
estExt_Genewise1Plus.C_110210 CCCH ZF 280 304
estExt_Genewise1Plus.C_110210 CCCH ZF 340 364
estExt_Genewise1Plus.C_110210 CCCH ZF 394 417
estExt_Genewise1Plus.C_110210 CCCH ZF 439 463

Links

Other CCCH ZF,RRM family RBPs
Other Phytophthora capsici RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PITG_10487 Phytophthora infestans PITG_10487 N 0.925
fgenesh1_pg.C_scaffold_112000041 Phytophthora ramorum fgenesh1_pg.C_scaffold_112000041 N 0.895
s_516083 Phytophthora sojae s_516083 N 0.921