CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ppa019338m
(
Prunus persica
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
ppa019338m
T01131_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ppa019338m
CCCH ZF
182
207
FPVKICHYFNKGFCKHGSSCRYYHGQ
ppa019338m
RRM
347
407
ESTFSEDDVSNYFSTFGPVEDVRIPCQQKRMFGFVTFVHADTVKMILAKGNPHYVCGSRVL
Links
Other
CCCH ZF,RRM
family RBPs
Other
Prunus persica
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCHAS_030750
Plasmodium chabaudi
PCHAS_030750
N
0.000
PFB0370c
Plasmodium falciparum
PFB0370c
N
0.000