emb1789 (Arabidopsis thaliana)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 AT5G56930-TAIR-G T01922_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G56930.1-P CCCH ZF 354 376
AT5G56930.1-P CCCH ZF 381 405
AT5G56930.1-P CCCH ZF 409 430

Links

Other CCCH ZF family RBPs
Other Arabidopsis thaliana RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002866127.1 Arabidopsis lyrata scaffold_802252.1 N 0.930
Glyma14g39390.1 Glycine max Glyma14g39390.1 N 0.732
Glyma18g10310.1 Glycine max Glyma18g10310.1 N 0.732
GSVIVG00015184001 Vitis vinifera GSVIVG00015184001 N 0.757