Glyma14g39390.1 (Glycine max)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Glyma14g39390.1 T05448_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma14g39390.1 CCCH ZF 50 72
Glyma14g39390.1 CCCH ZF 76 101
Glyma14g39390.1 CCCH ZF 105 126

Links

Other CCCH ZF family RBPs
Other Glycine max RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma18g10310.1 Glycine max Glyma18g10310.1 N 0.930
GSVIVG00015184001 Vitis vinifera GSVIVG00015184001 N 0.743
XM_002866127.1 Arabidopsis lyrata scaffold_802252.1 N 0.732
emb1789 Arabidopsis thaliana AT5G56930-TAIR-G N 0.732
Cucsa.018350 Cucumis sativus Cucsa.018350 N 0.730
29838.m001638 Ricinus communis 29838.m001638 N 0.722
PK20740.1 Cannabis sativa PK20740.1 N 0.720
B9HDY4_POPTR Populus trichocarpa POPTR_0006s15080 N 0.703