CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZFP36L2
(
Choloepus hoffmanni
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSCHOG00000005595
T02322_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000004955
CCCH ZF
122
148
YKTELCRPSEESVTCKYNKKCMFAHGY
ENSCHOP00000004955
CCCH ZF
160
185
YKTEVSRTFHTIGFCPYRPRRHFIHR
Links
Other
CCCH ZF
family RBPs
Other
Choloepus hoffmanni
RBPs
93 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R004924
Ailuropoda melanoleuca
Ame_R004924
I
0.741
Ame_R000168
Ailuropoda melanoleuca
Ame_R000168
I
0.778
ENSACAG00000005547
Anolis carolinensis
ENSACAG00000005547
I
0.741
ZFP36L2
Anolis carolinensis
ENSACAG00000014740
I
0.759
amel4_ncbi_hmm10964
Apis mellifera
amel4_ncbi_hmm10964
I
0.796
A7MB98_BOVIN
Bos taurus
ENSBTAG00000025434
I
0.741
Q1JP65_BOVIN
Bos taurus
ENSBTAG00000003553
I
0.778
estExt_fgenesh2_pg.C_680108
Branchiostoma floridae
estExt_fgenesh2_pg.C_680108
I
0.741
LOC100405281
Callithrix jacchus
ENSCJAG00000015116
I
0.741
LOC100386590
Callithrix jacchus
ENSCJAG00000014571
I
0.778
ZFP36L1
Canis familiaris
ENSCAFG00000016497
I
0.741
ZFP36L2
Canis familiaris
ENSCAFG00000002438
I
0.778
gw1.534.24.1
Capitella teleta
gw1.534.24.1
I
0.704
ZFP36L2
Cavia porcellus
ENSCPOG00000022038
I
0.759
ZFP36L1
Cavia porcellus
ENSCPOG00000025078
I
0.741
Q4H2G7_CIOIN
Ciona intestinalis
ENSCING00000014446
I
0.704
ENSCSAVG00000002923
Ciona savignyi
ENSCSAVG00000002923
I
0.704
CABZ01070258.1
Danio rerio
ENSDARG00000040503
I
0.741
zfp36l2
Danio rerio
ENSDARG00000021806
I
0.759
zfp36l1b
Danio rerio
ENSDARG00000021443
I
0.722
zfp36l1a
Danio rerio
ENSDARG00000016154
I
0.741
gw1.42.93.1
Daphnia pulex
gw1.42.93.1
N
0.741
ZFP36L1
Dasypus novemcinctus
ENSDNOG00000005159
I
0.741
Zfp36l1
Dipodomys ordii
ENSDORG00000008348
I
0.741
GH17894
Drosophila grimshawi
FBgn0125362
N
0.704
GJ15863
Drosophila virilis
FBgn0203050
N
0.704
GK25600
Drosophila willistoni
FBgn0227559
N
0.704
LOC100063597
Equus caballus
ENSECAG00000018860
I
0.741
ZFP36L2
Felis catus
ENSFCAG00000013462
N
0.722
ENSGACG00000013400
Gasterosteus aculeatus
ENSGACG00000013400
I
0.741
ZFP36L1
Gasterosteus aculeatus
ENSGACG00000011271
I
0.741
ZFP36L2
Gorilla gorilla
ENSGGOG00000001402
I
0.778
ZFP36L1
Homo sapiens
ENSG00000185650
I
0.741
ZFP36L2
Homo sapiens
ENSG00000152518
I
0.778
XP_002159721.1
Hydra magnipapillata
XP_002159721.1
N
0.741
gw1.30.59.1
Lottia gigantea
gw1.30.59.1
N
0.722
ZFP36L2
Loxodonta africana
ENSLAFG00000004265
I
0.778
ZFP36L1
Loxodonta africana
ENSLAFG00000028594
I
0.741
ZFP36L1
Macropus eugenii
ENSMEUG00000003070
I
0.741
ZFP36L2
Macropus eugenii
ENSMEUG00000010649
I
0.778
ZFP36L2
Microcebus murinus
ENSMICG00000010318
I
0.778
ZFP36L2
Monodelphis domestica
ENSMODG00000000407
I
0.778
Zfp36l2
Mus musculus
ENSMUSG00000045817
I
0.778
Zfp36l1
Mus musculus
ENSMUSG00000021127
I
0.741
Zfp36l3
Mus musculus
ENSMUSG00000059334
I
0.722
ZFP36L2
Myotis lucifugus
ENSMLUG00000015588
I
0.778
nasonia_NCBI_hmm9264
Nasonia vitripennis
nasonia_NCBI_hmm9264
I
0.741
e_gw.346.37.1
Nematostella vectensis
e_gw.346.37.1
I
0.796
ZFP36L2
Ornithorhynchus anatinus
ENSOANG00000002848
I
0.759
ZFP36L1
Oryctolagus cuniculus
ENSOCUG00000003168
I
0.741
ZFP36L1
Oryzias latipes
ENSORLG00000011106
I
0.741
ENSORLG00000000589
Oryzias latipes
ENSORLG00000000589
I
0.722
XR_022888.1
Pan troglodytes
ENSPTRG00000030712
I
0.741
ZFP36L2
Pan troglodytes
ENSPTRG00000011870
I
0.778
ENSPPYG00000005933
Pongo pygmaeus
ENSPPYG00000005933
I
0.741
ENSPPYG00000012458
Pongo pygmaeus
ENSPPYG00000012458
I
0.778
ZFP36L2
Procavia capensis
ENSPCAG00000010765
I
0.759
ZFP36L1
Procavia capensis
ENSPCAG00000005383
I
0.741
ZFP36L1
Pteropus vampyrus
ENSPVAG00000011686
I
0.741
Zfp36l2
Rattus norvegicus
ENSRNOG00000005067
I
0.778
TISB_RAT
Rattus norvegicus
ENSRNOG00000030024
I
0.741
Zfp36l3
Rattus norvegicus
ENSRNOG00000029788
I
0.704
ZFP36L1
Spermophilus tridecemlineatus
ENSSTOG00000009758
I
0.741
XP_782811.1
Strongylocentrotus purpuratus
XP_782811.1
I
0.741
XP_001175665.1
Strongylocentrotus purpuratus
XP_001175665.1
I
0.741
XP_001178437.1
Strongylocentrotus purpuratus
XP_001178437.1
I
0.741
XP_001175810.1
Strongylocentrotus purpuratus
XP_001175810.1
I
0.741
ZFP36L1
Sus scrofa
ENSSSCG00000002302
I
0.741
ENSSSCG00000008460
Sus scrofa
ENSSSCG00000008460
I
0.778
ZFP36L2
Sus scrofa
ENSSSCG00000008461
I
0.778
ZFP36L1
Taeniopygia guttata
ENSTGUG00000011494
I
0.741
ZFP36L1
Takifugu rubripes
ENSTRUG00000012295
I
0.741
ENSTRUG00000003178
Takifugu rubripes
ENSTRUG00000003178
I
0.722
ZFP36L2
Takifugu rubripes
ENSTRUG00000006923
I
0.759
ZFP36L1
Tarsius syrichta
ENSTSYG00000009284
I
0.741
ZFP36L2
Tetraodon nigroviridis
ENSTNIG00000017103
I
0.759
ENSTNIG00000019802
Tetraodon nigroviridis
ENSTNIG00000019802
I
0.741
ZFP36L1
Tetraodon nigroviridis
ENSTNIG00000002277
I
0.722
e_gw1.40.110.1
Trichoplax adhaerens
e_gw1.40.110.1
I
0.759
ZFP36L2
Tupaia belangeri
ENSTBEG00000012370
I
0.778
ZFP36L1
Tursiops truncatus
ENSTTRG00000003475
I
0.741
ZFP36L2
Tursiops truncatus
ENSTTRG00000006356
I
0.778
Q805B4
Xenopus laevis
Q805B4
I
0.741
Q7ZXW9
Xenopus laevis
Q7ZXW9
I
0.759
BAC54909
Xenopus laevis
BAC54909
I
0.741
AAI00163
Xenopus laevis
AAI00163
I
0.741
AAH84221
Xenopus laevis
AAH84221
I
0.741
AAH84197
Xenopus laevis
AAH84197
I
0.741
AAH44086
Xenopus laevis
AAH44086
I
0.759
AAD24209
Xenopus laevis
AAD24209
I
0.741
AAD24208
Xenopus laevis
AAD24208
I
0.741
zfp36l2
Xenopus tropicalis
ENSXETG00000009274
I
0.759
zfp36l1
Xenopus tropicalis
ENSXETG00000016987
I
0.741