gw1.30.59.1 (Lottia gigantea)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 gw1.30.59.1 T05534_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.30.59.1 CCCH ZF 4 30
gw1.30.59.1 CCCH ZF 42 68

Links

Other CCCH ZF family RBPs
Other Lottia gigantea RBPs

137 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pg.C_680108 Branchiostoma floridae estExt_fgenesh2_pg.C_680108 I 0.926
ZFP36L1 Procavia capensis ENSPCAG00000005383 I 0.907
ZFP36L1 Oryzias latipes ENSORLG00000011106 I 0.907
ZFP36L1 Oryctolagus cuniculus ENSOCUG00000003168 I 0.907
A7MB98_BOVIN Bos taurus ENSBTAG00000025434 I 0.907
ENSACAG00000005547 Anolis carolinensis ENSACAG00000005547 I 0.907
TISB_RAT Rattus norvegicus ENSRNOG00000030024 I 0.907
ZFP36L1 Pteropus vampyrus ENSPVAG00000011686 I 0.907
ZFP36L1 Gasterosteus aculeatus ENSGACG00000011271 I 0.907
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.907
ZFP36L1 Canis familiaris ENSCAFG00000016497 I 0.907
LOC100405281 Callithrix jacchus ENSCJAG00000015116 I 0.907
LOC100063597 Equus caballus ENSECAG00000018860 I 0.907
ZFP36L1 Macropus eugenii ENSMEUG00000003070 I 0.907
ZFP36L1 Loxodonta africana ENSLAFG00000028594 I 0.907
ZFP36L1 Homo sapiens ENSG00000185650 I 0.907
Zfp36l1 Dipodomys ordii ENSDORG00000008348 I 0.907
ZFP36L1 Dasypus novemcinctus ENSDNOG00000005159 I 0.907
ZFP36L1 Sus scrofa ENSSSCG00000002302 I 0.907
ZFP36L1 Cavia porcellus ENSCPOG00000025078 I 0.907
zfp36l1a Danio rerio ENSDARG00000016154 I 0.907
Zfp36l1 Mus musculus ENSMUSG00000021127 I 0.907
XR_022888.1 Pan troglodytes ENSPTRG00000030712 I 0.907
ZFP36L1 Spermophilus tridecemlineatus ENSSTOG00000009758 I 0.907
ZFP36L1 Takifugu rubripes ENSTRUG00000012295 I 0.907
AAD24208 Xenopus laevis AAD24208 I 0.907
ZFP36L1 Tarsius syrichta ENSTSYG00000009284 I 0.907
AAH84197 Xenopus laevis AAH84197 I 0.907
zfp36l1 Xenopus tropicalis ENSXETG00000016987 I 0.907
AAI00163 Xenopus laevis AAI00163 I 0.907
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.907
Ame_R004924 Ailuropoda melanoleuca Ame_R004924 I 0.907
BAC54909 Xenopus laevis BAC54909 I 0.889
ZFP36L1 Tetraodon nigroviridis ENSTNIG00000002277 I 0.889
ZFP36L2 Cavia porcellus ENSCPOG00000022038 I 0.889
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.889
ZFP36L2 Ornithorhynchus anatinus ENSOANG00000002848 I 0.889
ENSCSAVG00000002923 Ciona savignyi ENSCSAVG00000002923 I 0.889
e_gw.346.37.1 Nematostella vectensis e_gw.346.37.1 I 0.889
Q4H2G7_CIOIN Ciona intestinalis ENSCING00000014446 I 0.889
amel4_ncbi_hmm10964 Apis mellifera amel4_ncbi_hmm10964 I 0.889
AAD24209 Xenopus laevis AAD24209 I 0.889
ZFP36L1 Taeniopygia guttata ENSTGUG00000011494 I 0.889
AAH84221 Xenopus laevis AAH84221 I 0.889
Q805B4 Xenopus laevis Q805B4 I 0.889
Zfp36l2 Rattus norvegicus ENSRNOG00000005067 I 0.870
zfp36l2 Xenopus tropicalis ENSXETG00000009274 I 0.870
ZFP36L2 Gorilla gorilla ENSGGOG00000001402 I 0.870
ZFP36L2 Loxodonta africana ENSLAFG00000004265 I 0.870
ENSSSCG00000008460 Sus scrofa ENSSSCG00000008460 I 0.870
gw1.42.93.1 Daphnia pulex gw1.42.93.1 N 0.870
ZFP36L2 Tursiops truncatus ENSTTRG00000006356 I 0.870
ZFP36L2 Myotis lucifugus ENSMLUG00000015588 I 0.870
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.870
ZFP36L2 Tupaia belangeri ENSTBEG00000012370 I 0.870
Zfp36l2 Mus musculus ENSMUSG00000045817 I 0.870
ZFP36L2 Sus scrofa ENSSSCG00000008461 I 0.870
ENSPPYG00000012458 Pongo pygmaeus ENSPPYG00000012458 I 0.870
ZFP36L2 Microcebus murinus ENSMICG00000010318 I 0.870
ZFP36L2 Monodelphis domestica ENSMODG00000000407 I 0.870
ZFP36L2 Pan troglodytes ENSPTRG00000011870 I 0.870
ZFP36L2 Macropus eugenii ENSMEUG00000010649 I 0.870
ZFP36L2 Homo sapiens ENSG00000152518 I 0.870
ZFP36L2 Canis familiaris ENSCAFG00000002438 I 0.870
XP_782811.1 Strongylocentrotus purpuratus XP_782811.1 I 0.870
XP_002159721.1 Hydra magnipapillata XP_002159721.1 N 0.870
Q1JP65_BOVIN Bos taurus ENSBTAG00000003553 I 0.870
AAH44086 Xenopus laevis AAH44086 I 0.870
ZFP36L2 Anolis carolinensis ENSACAG00000014740 I 0.870
Q7ZXW9 Xenopus laevis Q7ZXW9 I 0.870
zfp36l1b Danio rerio ENSDARG00000021443 I 0.870
LOC100386590 Callithrix jacchus ENSCJAG00000014571 I 0.870
zfp36l2 Danio rerio ENSDARG00000021806 I 0.870
Ame_R000168 Ailuropoda melanoleuca Ame_R000168 I 0.870
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.870
XP_001175810.1 Strongylocentrotus purpuratus XP_001175810.1 I 0.870
XP_001175665.1 Strongylocentrotus purpuratus XP_001175665.1 I 0.870
XP_001178437.1 Strongylocentrotus purpuratus XP_001178437.1 I 0.870
ZFP36L2 Procavia capensis ENSPCAG00000010765 I 0.852
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.852
64152 Helobdella robusta 64152 N 0.852
nasonia_NCBI_hmm9264 Nasonia vitripennis nasonia_NCBI_hmm9264 I 0.852
BGIBMGA008337 Bombyx mori BGIBMGA008337 I 0.833
AAEL002308 Aedes aegypti AAEL002308 I 0.833
CpipJ_CPIJ018734 Culex pipiens CpipJ_CPIJ018734 I 0.833
CPIJ018734 Culex quinquefasciatus CPIJ018734 I 0.833
ENSTNIG00000019802 Tetraodon nigroviridis ENSTNIG00000019802 I 0.815
ZFP36L2 Felis catus ENSFCAG00000013462 N 0.815
AGAP010954 Anopheles gambiae AGAP010954 N 0.815
CABZ01070258.1 Danio rerio ENSDARG00000040503 I 0.815
ENSGACG00000013400 Gasterosteus aculeatus ENSGACG00000013400 I 0.815
GE17025 Drosophila yakuba FBgn0234511 N 0.796
Zfp36l3 Rattus norvegicus ENSRNOG00000029788 I 0.796
GL13141 Drosophila persimilis FBgn0150747 N 0.796
GA17935-RA Drosophila pseudoobscura FBgn0077944 N 0.796
GG17735 Drosophila erecta FBgn0109957 N 0.796
GF21384 Drosophila ananassae FBgn0098386 N 0.796
Tis11 Drosophila melanogaster FBgn0011837 N 0.796
ENSTRUG00000003178 Takifugu rubripes ENSTRUG00000003178 I 0.796
Zfp36l3 Mus musculus ENSMUSG00000059334 I 0.796
ENSORLG00000000589 Oryzias latipes ENSORLG00000000589 I 0.796
GM11580 Drosophila sechellia FBgn0166523 N 0.796
ZFP36 Gasterosteus aculeatus ENSGACG00000008344 I 0.778
GJ15863 Drosophila virilis FBgn0203050 N 0.778
GH17894 Drosophila grimshawi FBgn0125362 N 0.778
GK25600 Drosophila willistoni FBgn0227559 N 0.778
GI21684 Drosophila mojavensis FBgn0144414 N 0.778
ZFP36 Takifugu rubripes ENSTRUG00000002023 I 0.778
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.759
Aqu1.221345 Amphimedon queenslandica Aqu1.221345 I 0.759
zgc:114130 Danio rerio ENSDARG00000040725 I 0.759
ZFP36 Danio rerio ENSDARG00000044395 I 0.741
PTSG_01604 Salpingoeca rosetta PTSG_01604 N 0.741
ZFP36L1 Otolemur garnettii ENSOGAG00000010033 N 0.727
138584 Helobdella robusta 138584 N 0.722
153596 Helobdella robusta 153596 N 0.722
fgenesh2_pg.scaffold_13000206 Monosiga brevicollis fgenesh2_pg.scaffold_13000206 N 0.722
ZFP36 Macropus eugenii ENSMEUG00000010317 I 0.722
ENSACAG00000009252 Anolis carolinensis ENSACAG00000009252 I 0.722
ZFP36L2 Choloepus hoffmanni ENSCHOG00000005595 N 0.722
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.722
ENSGACG00000008351 Gasterosteus aculeatus ENSGACG00000008351 I 0.722
ZFP36 Tetraodon nigroviridis ENSTNIG00000000183 I 0.722
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.704
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.704
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.704
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.704
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.704
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.704
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.704
AAI08849 Xenopus laevis AAI08849 I 0.704
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.704
AAH82435 Xenopus laevis AAH82435 I 0.704
AAD24207 Xenopus laevis AAD24207 I 0.704
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.704
zfp36 Xenopus tropicalis ENSXETG00000002899 I 0.704
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.704