CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUPL2
(
Loxodonta africana
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSLAFG00000007523
T02784_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000006326
CCCH ZF
1
18
MTICQFFLQGRCRFGDRC
Links
Other
CCCH ZF
family RBPs
Other
Loxodonta africana
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
e_gw.526.41.1
Branchiostoma floridae
e_gw.526.41.1
N
0.000
estExt_fgenesh2_pm.C_220017
Branchiostoma floridae
estExt_fgenesh2_pm.C_220017
N
0.000
ENSLAFG00000028496
Loxodonta africana
ENSLAFG00000028496
N
0.000
ENSPCAG00000003709
Procavia capensis
ENSPCAG00000003709
N
0.000
XP_001189425.1
Strongylocentrotus purpuratus
XP_001189425.1
N
0.000
XP_792919.2
Strongylocentrotus purpuratus
XP_792919.2
N
0.000