CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DUS3L
(
Ochotona princeps
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOPRG00000000954
T03101_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000000882
CCCH ZF
86
114
DQYRLCPTVIQESASSCLFGDRCRFLHDL
ENSOPRP00000000882
CCCH ZF
126
146
GPRCVLFDTFGRCPYGVTCRF
Links
Other
CCCH ZF
family RBPs
Other
Ochotona princeps
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R016396
Ailuropoda melanoleuca
Ame_R016396
N
0.765
DUS3L
Bos taurus
ENSBTAG00000011842
N
0.706
DUS3L
Callithrix jacchus
ENSCJAG00000016997
N
0.804
DUS3L
Cavia porcellus
ENSCPOG00000021236
N
0.765
DUS3L
Echinops telfairi
ENSETEG00000004749
N
0.706
DUS3L
Gorilla gorilla
ENSGGOG00000027433
N
0.784
DUS3L
Homo sapiens
ENSG00000141994
N
0.804
DUS3L
Loxodonta africana
ENSLAFG00000027552
N
0.765
Dus3l
Mus musculus
ENSMUSG00000007603
N
0.706
DUS3L
Pan troglodytes
ENSPTRG00000010343
N
0.804
ENSPPYG00000009435
Pongo pygmaeus
ENSPPYG00000009435
N
0.804
DUS3L
Taeniopygia guttata
ENSTGUG00000001021
N
0.720