ZC3H4 (Tetraodon nigroviridis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTNIG00000013432 T03495_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000016427 CCCH ZF 191 216
ENSTNIP00000016427 CCCH ZF 220 245
ENSTNIP00000016427 CCCH ZF 247 272

Links

Other CCCH ZF family RBPs
Other Tetraodon nigroviridis RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011358 Ailuropoda melanoleuca Ame_R011358 N 0.772
ZC3H4 Anolis carolinensis ENSACAG00000003986 N 0.709
ZC3H4 Bos taurus ENSBTAG00000009286 N 0.772
ZC3H4 Callithrix jacchus ENSCJAG00000011601 N 0.705
ZC3H4 Canis familiaris ENSCAFG00000004182 N 0.772
ZC3H4 Cavia porcellus ENSCPOG00000012610 N 0.772
ZC3H4 Danio rerio ENSDARG00000078355 N 0.848
ZC3H4 Dasypus novemcinctus ENSDNOG00000003764 N 0.772
Zc3h4 Dipodomys ordii ENSDORG00000002726 N 0.772
ZC3H4 Echinops telfairi ENSETEG00000005763 N 0.734
ZC3H4 Equus caballus ENSECAG00000024342 N 0.785
ZC3H4 Gasterosteus aculeatus ENSGACG00000012374 N 0.911
ZC3H4 Gorilla gorilla ENSGGOG00000013071 N 0.772
ZC3H4 Homo sapiens ENSG00000130749 N 0.772
ZC3H4 Loxodonta africana ENSLAFG00000001586 N 0.772
ZC3H4 Macaca mulatta ENSMMUG00000014709 N 0.772
ZC3H4 Microcebus murinus ENSMICG00000008786 N 0.722
ZC3H4 Monodelphis domestica ENSMODG00000008978 N 0.772
Zc3h4 Mus musculus ENSMUSG00000059273 N 0.772
ENSMLUG00000002995 Myotis lucifugus ENSMLUG00000002995 N 0.709
ZC3H4 Ochotona princeps ENSOPRG00000014889 N 0.772
ZC3H4 Ornithorhynchus anatinus ENSOANG00000001794 N 0.785
ENSOCUG00000026069 Oryctolagus cuniculus ENSOCUG00000026069 N 0.747
ZC3H4 Pan troglodytes ENSPTRG00000011201 N 0.772
ENSPPYG00000010167 Pongo pygmaeus ENSPPYG00000010167 N 0.772
ZC3H4 Pteropus vampyrus ENSPVAG00000005687 N 0.772
LOC678741 Rattus norvegicus ENSRNOG00000015229 N 0.772
ZC3H4 Sorex araneus ENSSARG00000014146 N 0.722
ZC3H4 Sus scrofa ENSSSCG00000003110 N 0.772
ZC3H4 Takifugu rubripes ENSTRUG00000007843 N 0.987
ZC3H4 Tarsius syrichta ENSTSYG00000000926 N 0.772