ZC3H4 (Takifugu rubripes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTRUG00000007843 T03528_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000019495 CCCH ZF 327 352
ENSTRUP00000019495 CCCH ZF 356 381
ENSTRUP00000019495 CCCH ZF 384 408
ENSTRUP00000019496 CCCH ZF 327 352
ENSTRUP00000019496 CCCH ZF 356 381
ENSTRUP00000019496 CCCH ZF 384 408
ENSTRUP00000019498 CCCH ZF 264 289
ENSTRUP00000019498 CCCH ZF 293 318
ENSTRUP00000019498 CCCH ZF 321 345
ENSTRUP00000019499 CCCH ZF 265 290
ENSTRUP00000019499 CCCH ZF 294 319
ENSTRUP00000019499 CCCH ZF 322 346

Links

Other CCCH ZF family RBPs
Other Takifugu rubripes RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011358 Ailuropoda melanoleuca Ame_R011358 N 0.782
ZC3H4 Anolis carolinensis ENSACAG00000003986 N 0.718
ZC3H4 Bos taurus ENSBTAG00000009286 N 0.782
ZC3H4 Callithrix jacchus ENSCJAG00000011601 N 0.714
ZC3H4 Canis familiaris ENSCAFG00000004182 N 0.782
ZC3H4 Cavia porcellus ENSCPOG00000012610 N 0.782
ZC3H4 Danio rerio ENSDARG00000078355 N 0.859
ZC3H4 Dasypus novemcinctus ENSDNOG00000003764 N 0.782
Zc3h4 Dipodomys ordii ENSDORG00000002726 N 0.782
ZC3H4 Echinops telfairi ENSETEG00000005763 N 0.744
ZC3H4 Equus caballus ENSECAG00000024342 N 0.795
ZC3H4 Gasterosteus aculeatus ENSGACG00000012374 N 0.911
ZC3H4 Gorilla gorilla ENSGGOG00000013071 N 0.782
ZC3H4 Homo sapiens ENSG00000130749 N 0.782
ZC3H4 Loxodonta africana ENSLAFG00000001586 N 0.782
ZC3H4 Macaca mulatta ENSMMUG00000014709 N 0.782
ZC3H4 Microcebus murinus ENSMICG00000008786 N 0.731
ZC3H4 Monodelphis domestica ENSMODG00000008978 N 0.782
Zc3h4 Mus musculus ENSMUSG00000059273 N 0.782
ENSMLUG00000010841 Myotis lucifugus ENSMLUG00000010841 N 0.705
ENSMLUG00000002995 Myotis lucifugus ENSMLUG00000002995 N 0.718
ZC3H4 Ochotona princeps ENSOPRG00000014889 N 0.782
ZC3H4 Ornithorhynchus anatinus ENSOANG00000001794 N 0.795
ENSOCUG00000026069 Oryctolagus cuniculus ENSOCUG00000026069 N 0.756
ZC3H4 Pan troglodytes ENSPTRG00000011201 N 0.782
ENSPPYG00000010167 Pongo pygmaeus ENSPPYG00000010167 N 0.782
ZC3H4 Pteropus vampyrus ENSPVAG00000005687 N 0.782
LOC678741 Rattus norvegicus ENSRNOG00000015229 N 0.782
ZC3H4 Sorex araneus ENSSARG00000014146 N 0.731
ZC3H4 Spermophilus tridecemlineatus ENSSTOG00000016249 N 0.705
ZC3H4 Sus scrofa ENSSSCG00000003110 N 0.782
ZC3H4 Tarsius syrichta ENSTSYG00000000926 N 0.782
ZC3H4 Tetraodon nigroviridis ENSTNIG00000013432 N 0.987