XM_002884531.1 (Arabidopsis lyrata)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh2_kg.3__645__AT3G06410.1 T03847_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__645__AT3G06410.1 CCCH ZF 50 76
fgenesh2_kg.3__645__AT3G06410.1 CCCH ZF 96 122
fgenesh2_kg.3__645__AT3G06410.1 CCCH ZF 144 170
fgenesh2_kg.3__645__AT3G06410.1 CCCH ZF 298 324
fgenesh2_kg.3__645__AT3G06410.1 CCCH ZF 344 370

Links

Other CCCH ZF family RBPs
Other Arabidopsis lyrata RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CJA03915 Caenorhabditis japonica CJA03915 N 0.000
CJA26046 Caenorhabditis japonica CJA26046 N 0.000
PTTG_11637 Puccinia triticina PTTG_11637 N 0.000
ENSTSYG00000011201 Tarsius syrichta ENSTSYG00000011201 N 0.000