GSVIVG00030514001 (Vitis vinifera)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 GSVIVG00030514001 T03898_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00030514001 CCCH ZF 48 74
GSVIVT00030514001 CCCH ZF 91 116
GSVIVT00030514001 CCCH ZF 135 161
GSVIVT00030514001 CCCH ZF 285 311
GSVIVT00030514001 CCCH ZF 331 357

Links

Other CCCH ZF family RBPs
Other Vitis vinifera RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM15B Anolis carolinensis ENSACAG00000007689 N 0.000
Q3MHV8_BOVIN Bos taurus ENSBTAG00000006500 N 0.000
ENSCJAG00000005531 Callithrix jacchus ENSCJAG00000005531 N 0.000
ENSCPOG00000026706 Cavia porcellus ENSCPOG00000026706 N 0.000
RBM15B Choloepus hoffmanni ENSCHOG00000009175 N 0.000
RBM15B Gallus gallus ENSGALG00000002372 N 0.000
RBM15B Loxodonta africana ENSLAFG00000012673 N 0.000
RBM15B Macropus eugenii ENSMEUG00000006207 N 0.000
RBM15B Monodelphis domestica ENSMODG00000011903 N 0.000
Rbm15b Mus musculus ENSMUSG00000045365 N 0.000
RBM15B Oryctolagus cuniculus ENSOCUG00000010322 N 0.000
Rbm15b Rattus norvegicus ENSRNOG00000014161 N 0.000
RBM15 Spermophilus tridecemlineatus ENSSTOG00000003366 N 0.000
RBM15 Taeniopygia guttata ENSTGUG00000000886 N 0.000
RBM15B Tarsius syrichta ENSTSYG00000003064 N 0.000